STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q7XXD3_ORYSJcDNA clone:J013102F20, full insert sequence; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (378 aa)    
Predicted Functional Partners:
COMT
Flavone 3'-O-methyltransferase 1; Methylates OH residues of flavonoid compounds. Can methylate eriodictyol, luteolin, quercetin and taxifolin. Methylates caffeate to produce ferrulate. Catalyzes the methylation of monolignols, the lignin precursors. Functions cooperatively with CAD2 in the culm internodes for the biosynthesis of monolignols. May be involved in lignin biosynthesis in leaves and roots. Involved in syringyl lignin biosynthesis. Can function as 5-hydroxyconiferaldehyde O- methyltransferase in the biosynthetic pathway to syringyl lignin. Involved in melatonin biosynthesis. [...]
  
 
 
0.923
A0A0P0VG76
Os02g0207900 protein.
   
 
 0.905
A0A0P0VA40
Os01g0837200 protein.
     
 0.897
NOMT_ORYSJ
Naringenin 7-O-methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase involved in the biosynthesis of the sakuranetin, an inducible defense mechanism of O.sativa against pathogen attack; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. COMT subfamily.
  
 
 
0.897
Q33B71_ORYSJ
Hydrolase, alpha/beta fold family protein, putative, expressed.
     
 0.896
Q2QUI2_ORYSJ
Phospholipase, putative, expressed.
   
 
 0.894
CAD2
Cinnamyl alcohol dehydrogenase 2; Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde and sinapaldehyde to their respective alcohols. Plays the major role in monolignol biosynthesis. Functions cooperatively with COMT in the culm internodes for the biosynthesis of monolignols, the lignin precursors. May be involved in lignin biosynthesis in leaves and roots. Belongs to the zinc-containing alcohol dehydrogenase family.
   
 
 0.894
A0A0P0V6T5
Os01g0688200 protein.
     
 0.893
4CL2
Probable 4-coumarate--CoA ligase 2.
     
 0.893
4CLL9
4-coumarate--CoA ligase-like 9.
     
 0.885
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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