STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THF1Protein THYLAKOID FORMATION1, chloroplastic; Involved in a dynamic process of vesicle-mediated thylakoid membrane biogenesis. Required for the normal organization of vesicles into mature thylakoid stacks and ultimately for leaf development (By similarity); Belongs to the THF1 family. (287 aa)    
Predicted Functional Partners:
TATB
Sec-independent protein translocase protein TATB, chloroplastic; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across the thylakoid membrane. Involved in delta pH-dependent protein transport required for chloroplast development, especially thylakoid membrane formation. TATC and TATB mediate precursor recognition, whereas TATA facilitates translocation.
  
   
 0.814
Q943W1_ORYSJ
cDNA clone:001-013-B04, full insert sequence.
  
  
 0.741
GPA1
Guanine nucleotide-binding protein alpha-1 subunit; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems (Probable). May function in a signal transduction pathway required for normal growth and development of internodes, leaves, panicles and seeds. Involved in gibberellin signal transduction. Involved in R gene-mediated disease resistance. Functions upstream of the small GTPase RAC1 in the early steps of signaling. Involved in brassinosteroid (BR) response. May not be a signaling molecule in BRI1-mediated [...]
    
 
 0.733
Q109L0_ORYSJ
PsbP family protein, expressed.
  
  
 0.593
Q5Z6P4_ORYSJ
cDNA clone:001-012-A05, full insert sequence.
  
  
 0.593
A0A0P0XF80
Os08g0347500 protein.
  
  
 0.589
Q6YW78_ORYSJ
cDNA clone:J013111G22, full insert sequence.
  
  
 0.585
Q6ZKB9_ORYSJ
cDNA clone:006-304-G06, full insert sequence.
  
  
 0.573
PSB28
Photosystem II reaction center PSB28 protein, chloroplastic; Belongs to the Psb28 family.
  
    0.572
Q0DXV3_ORYSJ
Os02g0731600 protein.
  
  
 0.570
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.