STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q850Z8_ORYSJPhosphoribosylformylglycinamidine cyclo-ligase,chloroplast/mitochondrial, putative, expressed. (398 aa)    
Predicted Functional Partners:
Q0JH25_ORYSJ
Os01g0888500 protein.
  
 
 0.995
B1046G12.39
Putative phosphoribosylaminoimidazole carboxylase, chloroplast.
 
 0.995
A0A0P0UZH5
Os01g0200175 protein.
  
 0.994
Q6ZKK5_ORYSJ
cDNA clone:J033107D20, full insert sequence.
 
 0.994
B9FM04_ORYSJ
Os05g0104650 protein.
  
 
 0.993
Q10MD1_ORYSJ
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 0.992
Q6I5V5_ORYSJ
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
 0.992
Q0JHB3_ORYSJ
Os01g0873100 protein.
 
 0.991
URED
Urease accessory protein D; Required for the maturation and activation of urease via the functional incorporation of the urease nickel metallocenter. Belongs to the UreD family.
  
 0.984
Q6ZK11_ORYSJ
cDNA clone:J033090F02, full insert sequence.
 
 
 0.983
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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