STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q852G0_ORYSJATP-dependent Clp protease proteolytic subunit. (259 aa)    
Predicted Functional Partners:
Q50LH5_ORYSJ
ATP-dependent Clp protease proteolytic subunit.
  
0.975
Q0JMF9_ORYSJ
ATP-dependent Clp protease proteolytic subunit.
  
 
0.963
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
 
0.950
Q10LK7_ORYSJ
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
0.946
A0A0N7KFI2
Os02g0564400 protein.
 
 0.920
A0A0P0WPU2
Os05g0533900 protein.
 
 0.920
Q5N8G6_ORYSJ
Os01g0886600 protein.
 
 0.920
Q6L4S1_ORYSJ
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
 
0.919
A0A0P0VHW4
Os02g0293500 protein.
 
 0.918
Q0JNQ7_ORYSJ
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
0.914
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.