STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q852J5_ORYSJLeucine-rich repeat transmembrane protein kinase, putative, expressed. (839 aa)    
Predicted Functional Partners:
Q8S7V9_ORYSJ
50S ribosomal protein L18, chloroplast, putative, expressed.
      
 0.461
ERG1
Elicitor-responsive protein 1; May play a role in plant defense signaling (Probable). Isoform 2 binds to phospholipids in a Ca(2+)-dependent manner in response to pathogen elicitors.
      
 0.450
Q8LI36_ORYSJ
cDNA clone:J033124G23, full insert sequence.
  
 
 
0.435
OsSERK1
cDNA clone:J013144J12, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
  
 
 
0.429
IRL2
Plant intracellular Ras-group-related LRR protein 2; Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction. Belongs to the SHOC2 family.
  
 
   0.406
IRL7
Plant intracellular Ras-group-related LRR protein 7; Leucine-rich repeat protein that likely mediates protein interactions, possibly in the context of signal transduction. Belongs to the SHOC2 family.
  
 
   0.402
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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