STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q8H2Y0_ORYSJOs07g0586700 protein. (622 aa)    
Predicted Functional Partners:
Q10PZ5_ORYSJ
Pyridoxal-phosphate dependent enzyme family protein, expressed.
   
 0.810
Q10MD1_ORYSJ
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.781
Q8W314_ORYSJ
Threonine dehydratase.
  
 
 0.779
SERR
Serine racemase; Catalyzes the synthesis of D-serine from L-serine. Has dehydratase activity towards both L-serine and D-serine.
  
 
 0.754
A0A0P0X294
Os07g0134400 protein.
    
 0.752
Q2QQ95_ORYSJ
Phosphoserine phosphatase, putative, expressed.
    
 0.740
Q2R0W7_ORYSJ
Phosphoserine phosphatase, putative, expressed.
    
 0.740
Q69TT2_ORYSJ
Os06g0476200 protein.
    
 0.740
OJ1715_A07.21
Phosphoacetylglucosamine mutase; Interconverts GlcNAc-6-P and GlcNAc-1-P; Belongs to the phosphohexose mutase family.
    
 0.740
Q7XHZ2_ORYSJ
cDNA clone:J013000J06, full insert sequence.
    
 0.740
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.