STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLO4Peroxisomal (S)-2-hydroxy-acid oxidase GLO4; Photorespiratory enzyme that can exert a strong regulation over photosynthesis, possibly through a feed-back inhibition on Rubisco activase. Not required for oxalate accumulation (By similarity). Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family. (366 aa)    
Predicted Functional Partners:
Q6ZFI6_ORYSJ
cDNA clone:J013000A23, full insert sequence.
  
 0.978
MS
Malate synthase; Belongs to the malate synthase family.
  
 
 0.974
ICL
Isocitrate lyase; Involved in storage lipid mobilization during the growth of higher plant seedling.
   
 
 0.961
Q6YU90_ORYSJ
cDNA clone:J013108J23, full insert sequence; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.958
CATC
Catalase isozyme C; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Responsible for the redox homeostasis in leaves. Prevents nitric oxide (NO) accumulation and subsequent NO-mediated leaf cell death as well as the S-nitrosylation of specific proteins (e.g. glyceraldehyde 3- phosphate dehydrogenase and thioredoxin) by degrading H(2)O(2). Involved in photorespiration. Promotes drought stress tolerance and recovery. Involved in NO-mediated enhanced tolerance to zinc oxide nanoparticles (ZnO NPs)- induced phytot [...]
   
 
 0.957
Q7XRA2_ORYSJ
cDNA clone:J013091I17, full insert sequence; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.956
Q7X6P0_ORYSJ
cDNA clone:001-205-D04, full insert sequence; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.954
Q69UU3_ORYSJ
cDNA clone:J013118J02, full insert sequence.
  
 
 0.953
CATA
Catalase isozyme A; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (By similarity). Involved in environmental stress response. Promotes drought stress tolerance and recovery.
   
 
 0.951
CATB
Catalase isozyme B; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (By similarity). May prevent the excessive accumulation of H(2)O(2) during water stress in response to the accumulation of abscisic acid (ABA). Involved in the modulation of ROS levels related to root growth regulation. Required for pollen viability and floret fertility upon heat stress (HS) by detoxifying reactive oxygen species (ROS) and malondialdehyde (MDA) accumulation in developing anthers exposed to HS.
   
 
 0.950
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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