STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q8H625_ORYSJcDNA clone:002-149-G11, full insert sequence. (302 aa)    
Predicted Functional Partners:
A0A0P0Y7X5
Os12g0203100 protein.
   
 0.953
B0L964_ORYSJ
Putative carotenoid isomerase ZEBRA2.
  
 
 0.935
A0A0P0W5A9
Os03g0841900 protein.
  
 
 0.932
Q0D4G9_ORYSJ
Os07g0626800 protein.
  
 
 0.932
Q2QLR3_ORYSJ
cDNA clone:J033128O13, full insert sequence.
  
 
 0.932
A0A0P0W9D2
Os04g0379700 protein.
   
  
 0.906
Q5ZC77_ORYSJ
Protein arginine methyltransferase NDUFAF7; Arginine methyltransferase involved in the assembly or stability of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).
  
  
 0.862
Q2QLQ4_ORYSJ
cDNA clone:001-105-B02, full insert sequence.
   
 
 0.860
Q6AUB0_ORYSJ
cDNA clone:001-008-C05, full insert sequence.
  
 
 0.826
Q8GVZ0_ORYSJ
cDNA clone:001-039-H09, full insert sequence.
  
 
 0.826
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.