STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q8H822_ORYSJGlucan endo-1,3-beta-glucosidase 3, putative, expressed; Belongs to the glycosyl hydrolase 17 family. (504 aa)    
Predicted Functional Partners:
Q653V4_ORYSJ
Os06g0676700 protein; Belongs to the glycosyl hydrolase 31 family.
   
 
  0.914
B1153E06.2
Probable alpha-glucosidase Os06g0675700.
   
 
  0.914
B9GBN5_ORYSJ
Os12g0127100 protein.
    
 0.896
Q2RB11_ORYSJ
Nse1 non-SMC component of SMC5-6 complex family protein, expressed.
    
 0.896
A0A0P0XJA8
Os09g0121050 protein.
    
 0.885
B7EZI6_ORYSJ
cDNA clone:002-113-D11, full insert sequence.
    
 0.885
A0A0N7KD76
Os01g0578700 protein.
    
 0.884
Q6AUG5_ORYSJ
cDNA clone:J033106F17, full insert sequence.
    
 0.884
Q60EH3_ORYSJ
cDNA clone:002-102-A08, full insert sequence.
    
  0.882
Q10CU9_ORYSJ
Glycosyl hydrolase family 3 N terminal domain containing protein, expressed.
    
  0.879
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.