STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q8LIR5_ORYSJcDNA clone:001-207-A08, full insert sequence; Belongs to the cytochrome P450 family. (517 aa)    
Predicted Functional Partners:
NIA1
Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.822
Q6ZC33_ORYSJ
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.822
Q6ZHH7_ORYSJ
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.822
APR1
Probable 5'-adenylylsulfate reductase 1, chloroplastic; Reduces sulfate for Cys biosynthesis.
    
 0.770
Q6YUU2_ORYSJ
Os02g0190600 protein.
     
 0.717
A0A0P0WS15
Os06g0111600 protein.
  
 0.708
Q336V3_ORYSJ
cDNA clone:J013039G17, full insert sequence; Belongs to the cytochrome P450 family.
  
 
 
0.700
CYP85A1
Cytochrome P450 85A1; May convert 6-deoxoteasterone to teasterone, 3-dehydro-6- deoxoteasterone to 3-dehydroteasterone, and 6-deoxotyphasterol to typhasterol. Catalyzes the C6-oxidation step in brassinosteroids biosynthesis. Involved in the organization and elongation of the leaf and stem cells.
  
  
 
0.695
A0A0P0W9D2
Os04g0379700 protein.
     
 0.692
A0A0P0WAS5
Os04g0448950 protein.
   
 0.642
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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