STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P0696G06.11cDNA clone:J033125C09, full insert sequence. (162 aa)    
Predicted Functional Partners:
A0A0P0VMS9
Os02g0664100 protein.
    
 
 0.586
Q0DYW4_ORYSJ
Os02g0664200 protein.
    
 
 0.586
Q6I5I7_ORYSJ
cDNA clone:001-041-A06, full insert sequence.
   
  
 0.541
Q8S227_ORYSJ
cDNA clone:006-302-G02, full insert sequence.
   
  
 0.541
Q10MY7_ORYSJ
Protein YIPF.
   
  
 0.517
Q5ZA96_ORYSJ
Os06g0320700 protein.
      
 0.505
MSRB1
Peptide methionine sulfoxide reductase B1, chloroplastic; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Involved in abiotic stress response. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R-enantiomer.
      
 0.497
A0A0P0Y9Q3
Os12g0438900 protein.
   
    0.422
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.