STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q94HP4_ORYSJOs10g0163400 protein. (139 aa)    
Predicted Functional Partners:
Q69PT1_ORYSJ
Os06g0326700 protein.
    
 0.757
Q6ZFU0_ORYSJ
cDNA clone:J023087O16, full insert sequence.
    
 0.757
Q6EP89_ORYSJ
Os02g0676000 protein; Belongs to the membrane-bound acyltransferase family.
     
 0.673
PSD1
Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.
     
 0.614
PSD2
Phosphatidylserine decarboxylase 2 alpha chain; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine.
     
 0.609
A0A0P0V8Q4
Os01g0773200 protein.
     
 0.586
A0A0P0WQP5
Os05g0549900 protein.
     
 0.582
Q0JQT7_ORYSJ
cDNA clone:J033011L13, full insert sequence.
     
 0.582
Q2QX18_ORYSJ
TCP family transcription factor containing protein, expressed.
     
 0.582
PCF3
Transcription factor PCF3; Transcription activator. Binds the promoter core sequence 5'- GGNCC-3'.
     
 0.582
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.