STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LST8Target of rapamycin complex subunit LST8; Component of TORC1 complex, which is an essential cell growth regulator that controls plant development. Acts by activating transcription, protein synthesis and ribosome biogenesis, and inhibiting mRNA degradation and autophagy. Belongs to the WD repeat LST8 family. (316 aa)    
Predicted Functional Partners:
TOR
Serine/threonine-protein kinase TOR; Component of TORC1 complex, which is an essential cell growth regulator that controls plant development. Acts through the phosphorylation of downstream effectors that are recruited by the binding partner RAPTOR. Acts by activating transcription, protein synthesis and ribosome biogenesis, and inhibiting mRNA degradation and autophagy.
    
 0.998
RAPTOR1
Regulatory-associated protein of TOR 1; Component of TORC1 complex, which is an essential cell growth regulator that controls plant development. Acts by recruiting substrates for TOR. Acts by activating transcription, protein synthesis and ribosome biogenesis, and inhibiting mRNA degradation and autophagy. Belongs to the WD repeat RAPTOR family.
    
 0.996
RAPTOR2
Regulatory-associated protein of TOR 2; Component of TORC1 complex, which is an essential cell growth regulator that controls plant development. Acts by recruiting substrates for TOR. Acts by activating transcription, protein synthesis and ribosome biogenesis, and inhibiting mRNA degradation and autophagy. Belongs to the WD repeat RAPTOR family.
    
 0.995
A0A0P0XY03
Os11g0109950 protein.
    
 0.994
A0A0P0Y662
Os12g0110050 protein.
    
 0.994
A0A0P0W2S9
Os03g0738200 protein.
    
 0.991
B9FYR6_ORYSJ
Os08g0113800 protein.
    
 0.991
A0A0P0XM67
Os09g0438400 protein.
   
 0.989
TAP46
PP2A regulatory subunit TAP46; Involved in the regulation of the TOR signaling pathway. Seems to act as a regulator of PP2A catalytic activity.
    
 0.967
Q0JQ41_ORYSJ
Os01g0183000 protein.
   
 0.962
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.