STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQP52489.1Sulfatase modifying factor 1 (C-alpha-formyglycine- generating enzyme 1); Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)    
Predicted Functional Partners:
AQP50787.1
Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.975
AQP50783.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.974
AQP51707.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.698
AQP52184.1
Heavy metal-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.675
AQP51353.1
Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.540
AQP52488.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.484
AQP51100.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.464
AQP50437.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
      
 0.450
AQP51292.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.450
AQP49740.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.421
Your Current Organism:
Tessaracoccus flavescens
NCBI taxonomy Id: 399497
Other names: DSM 18582, JCM 16025, KCTC 19196, T. flavescens, Tessaracoccus flavescens Lee and Lee 2008, strain SST-39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.