STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOH39346.1Iron permease FTR1; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)    
Predicted Functional Partners:
AOH39663.1
Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.946
AOH39662.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.869
AOH39661.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.853
AOH39345.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.849
AOH39660.1
FMN-binding domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.846
AOH39344.1
GTPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.795
AOH39434.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.766
AOH39349.1
Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.739
AOH39348.1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.692
AOH39347.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.659
Your Current Organism:
Dialister pneumosintes
NCBI taxonomy Id: 39950
Other names: ATCC 33048, Bacillus pneumosintes, Bacterium pneumosintes, Bacteroides pneumosintes, CCUG 21025, CIP 107041, D. pneumosintes, DSM 11619, Dialister pneumosintes var. septicemiae, JCM 10004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.