Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Msed_0336PFAM: Enoyl-CoA hydratase/isomerase. (239 aa)    
Predicted Functional Partners:
Msed_0270
Acetyl-CoA acetyltransferase-like protein.
  
 0.861
Msed_0271
Acetyl-CoA acetyltransferase-like protein.
  
 0.861
Msed_0386
Propanoyl-CoA C-acyltransferase; PFAM: Thiolase.
  
 0.861
Msed_0396
PFAM: Thiolase.
  
 0.861
Msed_0656
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase.
  
 0.861
Msed_1008
Acetyl-CoA acetyltransferase-like protein.
  
 0.861
Msed_1290
Propanoyl-CoA C-acyltransferase.
  
 0.861
Msed_1647
Acetyl-CoA acetyltransferase-like protein.
  
 0.861
Msed_1467
Aconitase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein.
  
 0.842
Msed_0331
PFAM: electron transfer flavoprotein beta-subunit.
  
 
 0.828
Your Current Organism:
Metallosphaera sedula
NCBI taxonomy Id: 399549
Other names: M. sedula DSM 5348, Metallosphaera sedula DSM 5348, Metallosphaera sedula IFO 15509, Metallosphaera sedula JCM 9185, Metallosphaera sedula NBRC 15509, Metallosphaera sedula str. DSM 5348, Metallosphaera sedula strain DSM 5348
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