Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Msed_0270 | Msed_0271 | Acetyl-CoA acetyltransferase-like protein. | Acetyl-CoA acetyltransferase-like protein. | 0.931 |
Msed_0270 | Msed_0386 | Acetyl-CoA acetyltransferase-like protein. | Propanoyl-CoA C-acyltransferase; PFAM: Thiolase. | 0.655 |
Msed_0270 | Msed_0389 | Acetyl-CoA acetyltransferase-like protein. | PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding. | 0.916 |
Msed_0270 | Msed_0396 | Acetyl-CoA acetyltransferase-like protein. | PFAM: Thiolase. | 0.665 |
Msed_0270 | Msed_0399 | Acetyl-CoA acetyltransferase-like protein. | PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.916 |
Msed_0270 | Msed_0400 | Acetyl-CoA acetyltransferase-like protein. | PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain. | 0.678 |
Msed_0270 | Msed_0656 | Acetyl-CoA acetyltransferase-like protein. | TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase. | 0.604 |
Msed_0270 | Msed_1290 | Acetyl-CoA acetyltransferase-like protein. | Propanoyl-CoA C-acyltransferase. | 0.671 |
Msed_0270 | Msed_1647 | Acetyl-CoA acetyltransferase-like protein. | Acetyl-CoA acetyltransferase-like protein. | 0.711 |
Msed_0271 | Msed_0270 | Acetyl-CoA acetyltransferase-like protein. | Acetyl-CoA acetyltransferase-like protein. | 0.931 |
Msed_0271 | Msed_0386 | Acetyl-CoA acetyltransferase-like protein. | Propanoyl-CoA C-acyltransferase; PFAM: Thiolase. | 0.687 |
Msed_0271 | Msed_0389 | Acetyl-CoA acetyltransferase-like protein. | PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding. | 0.913 |
Msed_0271 | Msed_0396 | Acetyl-CoA acetyltransferase-like protein. | PFAM: Thiolase. | 0.693 |
Msed_0271 | Msed_0399 | Acetyl-CoA acetyltransferase-like protein. | PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.913 |
Msed_0271 | Msed_0400 | Acetyl-CoA acetyltransferase-like protein. | PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain. | 0.678 |
Msed_0271 | Msed_0656 | Acetyl-CoA acetyltransferase-like protein. | TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase. | 0.600 |
Msed_0271 | Msed_1290 | Acetyl-CoA acetyltransferase-like protein. | Propanoyl-CoA C-acyltransferase. | 0.705 |
Msed_0271 | Msed_1647 | Acetyl-CoA acetyltransferase-like protein. | Acetyl-CoA acetyltransferase-like protein. | 0.718 |
Msed_0386 | Msed_0270 | Propanoyl-CoA C-acyltransferase; PFAM: Thiolase. | Acetyl-CoA acetyltransferase-like protein. | 0.655 |
Msed_0386 | Msed_0271 | Propanoyl-CoA C-acyltransferase; PFAM: Thiolase. | Acetyl-CoA acetyltransferase-like protein. | 0.687 |
page 1 of 5