STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Msed_0611Uncharacterized MobA-related protein-like protein. (187 aa)    
Predicted Functional Partners:
Msed_2024
Molybdopterin-guanine dinucleotide biosynthesis protein A-like protein.
    
 0.919
Msed_2023
PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II.
    
  0.909
Msed_0645
Molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE; TIGRFAM: MoaD family protein; PFAM: molybdopterin biosynthesis MoaE protein; thiamineS protein.
       0.823
Msed_1387
Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family-like protein.
 
  
 0.817
Msed_0612
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
    0.798
Msed_0610
PFAM: ferredoxin; [2Fe-2S]-binding domain protein.
 
  
 0.658
Msed_0298
Glyceraldehyde oxidoreductase small chain; PFAM: ferredoxin; [2Fe-2S]-binding domain protein.
 
  
 0.653
Msed_0613
PFAM: GHMP kinase.
       0.560
Msed_0614
Pantothenate synthetase; PFAM: protein of unknown function DUF137.
       0.560
Msed_0930
PFAM: hydrogenase formation HypD protein.
       0.552
Your Current Organism:
Metallosphaera sedula
NCBI taxonomy Id: 399549
Other names: M. sedula DSM 5348, Metallosphaera sedula DSM 5348, Metallosphaera sedula IFO 15509, Metallosphaera sedula JCM 9185, Metallosphaera sedula NBRC 15509, Metallosphaera sedula str. DSM 5348, Metallosphaera sedula strain DSM 5348
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.