Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Msed_0978 | Msed_0979 | Msed_0978 | Msed_0979 | Hypothetical protein. | Thymidylate kinase-like protein. | 0.799 |
Msed_0978 | Msed_0981 | Msed_0978 | Msed_0981 | Hypothetical protein. | PFAM: Ppx/GppA phosphatase. | 0.800 |
Msed_0978 | Msed_0982 | Msed_0978 | Msed_0982 | Hypothetical protein. | TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase. | 0.800 |
Msed_0978 | tmk | Msed_0978 | Msed_0980 | Hypothetical protein. | PFAM: thymidylate kinase. | 0.799 |
Msed_0979 | Msed_0978 | Msed_0979 | Msed_0978 | Thymidylate kinase-like protein. | Hypothetical protein. | 0.799 |
Msed_0979 | Msed_0981 | Msed_0979 | Msed_0981 | Thymidylate kinase-like protein. | PFAM: Ppx/GppA phosphatase. | 0.821 |
Msed_0979 | Msed_0982 | Msed_0979 | Msed_0982 | Thymidylate kinase-like protein. | TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase. | 0.830 |
Msed_0979 | Msed_1317 | Msed_0979 | Msed_1317 | Thymidylate kinase-like protein. | Hypothetical protein. | 0.924 |
Msed_0979 | Msed_1716 | Msed_0979 | Msed_1716 | Thymidylate kinase-like protein. | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.937 |
Msed_0979 | ndk | Msed_0979 | Msed_0029 | Thymidylate kinase-like protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 0.923 |
Msed_0979 | rfcL | Msed_0979 | Msed_2049 | Thymidylate kinase-like protein. | Replication factor C large subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. | 0.732 |
Msed_0979 | thyX | Msed_0979 | Msed_1894 | Thymidylate kinase-like protein. | Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.924 |
Msed_0979 | tmk | Msed_0979 | Msed_0980 | Thymidylate kinase-like protein. | PFAM: thymidylate kinase. | 0.982 |
Msed_0979 | tmk-2 | Msed_0979 | Msed_2036 | Thymidylate kinase-like protein. | PFAM: thymidylate kinase. | 0.929 |
Msed_0981 | Msed_0978 | Msed_0981 | Msed_0978 | PFAM: Ppx/GppA phosphatase. | Hypothetical protein. | 0.800 |
Msed_0981 | Msed_0979 | Msed_0981 | Msed_0979 | PFAM: Ppx/GppA phosphatase. | Thymidylate kinase-like protein. | 0.821 |
Msed_0981 | Msed_0982 | Msed_0981 | Msed_0982 | PFAM: Ppx/GppA phosphatase. | TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase. | 0.863 |
Msed_0981 | tmk | Msed_0981 | Msed_0980 | PFAM: Ppx/GppA phosphatase. | PFAM: thymidylate kinase. | 0.821 |
Msed_0982 | Msed_0978 | Msed_0982 | Msed_0978 | TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase. | Hypothetical protein. | 0.800 |
Msed_0982 | Msed_0979 | Msed_0982 | Msed_0979 | TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase. | Thymidylate kinase-like protein. | 0.830 |
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