node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Msed_1601 | Msed_1683 | Msed_1601 | Msed_1683 | Ser-tRNA(Thr) hydrolase; PFAM: Anticodon-binding domain protein. | TIGRFAM: valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.826 |
Msed_1601 | cysS | Msed_1601 | Msed_2077 | Ser-tRNA(Thr) hydrolase; PFAM: Anticodon-binding domain protein. | TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia. | 0.503 |
Msed_1601 | gltX | Msed_1601 | Msed_2131 | Ser-tRNA(Thr) hydrolase; PFAM: Anticodon-binding domain protein. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.526 |
Msed_1601 | infB | Msed_1601 | Msed_0030 | Ser-tRNA(Thr) hydrolase; PFAM: Anticodon-binding domain protein. | Translation initiation factor eaIF-5B; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | 0.839 |
Msed_1601 | rpl2 | Msed_1601 | Msed_0094 | Ser-tRNA(Thr) hydrolase; PFAM: Anticodon-binding domain protein. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.774 |
Msed_1601 | rpl5 | Msed_1601 | Msed_0104 | Ser-tRNA(Thr) hydrolase; PFAM: Anticodon-binding domain protein. | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.793 |
Msed_1601 | rps11 | Msed_1601 | Msed_2146 | Ser-tRNA(Thr) hydrolase; PFAM: Anticodon-binding domain protein. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.830 |
Msed_1601 | rps12 | Msed_1601 | Msed_0038 | Ser-tRNA(Thr) hydrolase; PFAM: Anticodon-binding domain protein. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. | 0.843 |
Msed_1601 | rps5 | Msed_1601 | Msed_0111 | Ser-tRNA(Thr) hydrolase; PFAM: Anticodon-binding domain protein. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. | 0.785 |
Msed_1601 | thrS-cat | Msed_1601 | Msed_1585 | Ser-tRNA(Thr) hydrolase; PFAM: Anticodon-binding domain protein. | threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also activates L-serine and transfers it to tRNA(Thr) but cannot deacylate incorrectly charged amino acid; unlike most archaea the editing function is found in a freestanding protein. | 0.902 |
Msed_1683 | Msed_1601 | Msed_1683 | Msed_1601 | TIGRFAM: valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Ser-tRNA(Thr) hydrolase; PFAM: Anticodon-binding domain protein. | 0.826 |
Msed_1683 | cysS | Msed_1683 | Msed_2077 | TIGRFAM: valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia. | 0.852 |
Msed_1683 | gltX | Msed_1683 | Msed_2131 | TIGRFAM: valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). | 0.815 |
Msed_1683 | infB | Msed_1683 | Msed_0030 | TIGRFAM: valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Translation initiation factor eaIF-5B; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | 0.810 |
Msed_1683 | rpl2 | Msed_1683 | Msed_0094 | TIGRFAM: valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.800 |
Msed_1683 | rpl5 | Msed_1683 | Msed_0104 | TIGRFAM: valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.774 |
Msed_1683 | rps11 | Msed_1683 | Msed_2146 | TIGRFAM: valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | SSU ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.715 |
Msed_1683 | rps12 | Msed_1683 | Msed_0038 | TIGRFAM: valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. | 0.483 |
Msed_1683 | rps5 | Msed_1683 | Msed_0111 | TIGRFAM: valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | SSU ribosomal protein S5P; With S4 and S12 plays an important role in translational accuracy. | 0.773 |
Msed_1683 | thrS-cat | Msed_1683 | Msed_1585 | TIGRFAM: valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr). Also activates L-serine and transfers it to tRNA(Thr) but cannot deacylate incorrectly charged amino acid; unlike most archaea the editing function is found in a freestanding protein. | 0.865 |