STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smar_0201PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: gvi:gll3341 mannose-1-phosphate guanyltransferase / phosphomannomutase. (837 aa)    
Predicted Functional Partners:
Smar_1156
TIGRFAM: bifunctional phosphoglucose/phosphomannose isomerase; PFAM: sugar isomerase (SIS); KEGG: aae:aq_750 hypothetical protein.
 
 0.992
Smar_0290
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility C-terminal domain; KEGG: pho:PH0378 UDP-glucose 4-epimerase.
 
 
 0.961
Smar_0121
PFAM: Nucleotidyl transferase; KEGG: rxy:Rxyl_1436 nucleotidyl transferase.
 
 
0.935
Smar_0246
PFAM: glycosyl transferase, group 1; KEGG: pai:PAE3422 starch phosphorylase.
 
 
 0.929
Smar_1286
PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: sto:ST0242 phosphomannomutase; Belongs to the phosphohexose mutase family.
 
 
0.929
Smar_0112
PFAM: glycosyl transferase, family 2; KEGG: sto:ST2337 dolichol-phosphate mannosyltransferase.
  
 
 0.913
Smar_0498
TIGRFAM: mannosyl-3-phosphoglycerate synthase; KEGG: ttj:TTHA0954 mannosyl-3-phosphoglycerate synthase.
    
 0.905
Smar_1393
PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; KEGG: sso:SSO0987 glycogen synthase.
 
  
 0.897
eif2a
Translation initiation factor 2 subunit alpha (aeIF-2a); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family.
   
 0.878
pgk
PFAM: phosphoglycerate kinase; KEGG: sto:ST1357 phosphoglycerate kinase.
  
 
 0.875
Your Current Organism:
Staphylothermus marinus
NCBI taxonomy Id: 399550
Other names: S. marinus F1, Staphylothermus marinus ATCC 43588, Staphylothermus marinus DSM 3639, Staphylothermus marinus F1, Staphylothermus marinus JCM 9404, Staphylothermus marinus str. F1, Staphylothermus marinus strain F1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.