Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Smar_0873 | Smar_0874 | KEGG: sai:Saci_1554 30S ribosomal protein S26E. | Hypothetical protein. | 0.444 |
Smar_0873 | Smar_0875 | KEGG: sai:Saci_1554 30S ribosomal protein S26E. | KEGG: ape:APE2102 hypothetical protein. | 0.437 |
Smar_0873 | Smar_0876 | KEGG: sai:Saci_1554 30S ribosomal protein S26E. | PFAM: putative RNA methylase; KEGG: sto:ST1428 hypothetical protein. | 0.650 |
Smar_0874 | Smar_0873 | Hypothetical protein. | KEGG: sai:Saci_1554 30S ribosomal protein S26E. | 0.444 |
Smar_0874 | Smar_0875 | Hypothetical protein. | KEGG: ape:APE2102 hypothetical protein. | 0.613 |
Smar_0874 | Smar_0876 | Hypothetical protein. | PFAM: putative RNA methylase; KEGG: sto:ST1428 hypothetical protein. | 0.444 |
Smar_0875 | Smar_0873 | KEGG: ape:APE2102 hypothetical protein. | KEGG: sai:Saci_1554 30S ribosomal protein S26E. | 0.437 |
Smar_0875 | Smar_0874 | KEGG: ape:APE2102 hypothetical protein. | Hypothetical protein. | 0.613 |
Smar_0875 | Smar_0876 | KEGG: ape:APE2102 hypothetical protein. | PFAM: putative RNA methylase; KEGG: sto:ST1428 hypothetical protein. | 0.797 |
Smar_0876 | Smar_0873 | PFAM: putative RNA methylase; KEGG: sto:ST1428 hypothetical protein. | KEGG: sai:Saci_1554 30S ribosomal protein S26E. | 0.650 |
Smar_0876 | Smar_0874 | PFAM: putative RNA methylase; KEGG: sto:ST1428 hypothetical protein. | Hypothetical protein. | 0.444 |
Smar_0876 | Smar_0875 | PFAM: putative RNA methylase; KEGG: sto:ST1428 hypothetical protein. | KEGG: ape:APE2102 hypothetical protein. | 0.797 |