STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smar_1007PFAM: phosphoadenosine phosphosulfate reductase; KEGG: pfu:PF1952 hypothetical protein. (656 aa)    
Predicted Functional Partners:
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
 0.994
sat
TIGRFAM: sulfate adenylyltransferase; PFAM: ATP-sulfurylase; KEGG: ape:APE1197 sulfate adenylyltransferase; Belongs to the sulfate adenylyltransferase family.
  
  
 0.813
Smar_0281
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmp:MMP1519 anion transport system permease protein.
  
  
 0.720
Smar_0603
TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: ape:APE2348 putative orotidine 5'-phosphate decarboxylase.
 
   
 0.538
Smar_0354
Cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mta:Moth_1706 cysteine synthase A.
  
  
 0.451
Smar_0681
Cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: pfu:PF1858 cysteine synthase.
  
  
 0.451
Smar_1008
Hypothetical protein; KEGG: bam:Bamb_4575 haemagluttinin domain protein.
       0.448
Smar_1283
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sat:SYN_01340 endonuclease IV.
  
    0.436
Smar_0563
PFAM: protein of unknown function DUF107; KEGG: mhu:Mhun_1615 protein of unknown function DUF107.
 
     0.411
Smar_0612
SMART: helix-turn-helix domain protein; KEGG: pfu:PF1386 putative transcriptional regulator.
 
     0.407
Your Current Organism:
Staphylothermus marinus
NCBI taxonomy Id: 399550
Other names: S. marinus F1, Staphylothermus marinus ATCC 43588, Staphylothermus marinus DSM 3639, Staphylothermus marinus F1, Staphylothermus marinus JCM 9404, Staphylothermus marinus str. F1, Staphylothermus marinus strain F1
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