node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Smar_1048 | cmk | Smar_1048 | Smar_1045 | tRNA pseudouridine synthase B; PFAM: PUA domain containing protein; pseudouridylate synthase TruB domain protein; KEGG: ape:APE0990 pseudouridylate synthase. | TIGRFAM: cytidylate kinase, putative; KEGG: ape:APE0978 cytidylate kinase. | 0.952 |
Smar_1048 | rpl11 | Smar_1048 | Smar_1093 | tRNA pseudouridine synthase B; PFAM: PUA domain containing protein; pseudouridylate synthase TruB domain protein; KEGG: ape:APE0990 pseudouridylate synthase. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. | 0.436 |
Smar_1048 | rpl14 | Smar_1048 | Smar_1029 | tRNA pseudouridine synthase B; PFAM: PUA domain containing protein; pseudouridylate synthase TruB domain protein; KEGG: ape:APE0990 pseudouridylate synthase. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.459 |
Smar_1048 | rpl14e | Smar_1048 | Smar_1046 | tRNA pseudouridine synthase B; PFAM: PUA domain containing protein; pseudouridylate synthase TruB domain protein; KEGG: ape:APE0990 pseudouridylate synthase. | KEGG: sai:Saci_0813 50S ribosomal protein L14E; Belongs to the eukaryotic ribosomal protein eL14 family. | 0.689 |
Smar_1048 | rpl22 | Smar_1048 | Smar_1024 | tRNA pseudouridine synthase B; PFAM: PUA domain containing protein; pseudouridylate synthase TruB domain protein; KEGG: ape:APE0990 pseudouridylate synthase. | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.504 |
Smar_1048 | rpl24 | Smar_1048 | Smar_1030 | tRNA pseudouridine synthase B; PFAM: PUA domain containing protein; pseudouridylate synthase TruB domain protein; KEGG: ape:APE0990 pseudouridylate synthase. | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.567 |
Smar_1048 | rpl34e | Smar_1048 | Smar_1044 | tRNA pseudouridine synthase B; PFAM: PUA domain containing protein; pseudouridylate synthase TruB domain protein; KEGG: ape:APE0990 pseudouridylate synthase. | PFAM: Ribosomal protein L34e; KEGG: ape:APE0978a S ribosomal protein L34E; Belongs to the eukaryotic ribosomal protein eL34 family. | 0.426 |
cmk | Smar_1048 | Smar_1045 | Smar_1048 | TIGRFAM: cytidylate kinase, putative; KEGG: ape:APE0978 cytidylate kinase. | tRNA pseudouridine synthase B; PFAM: PUA domain containing protein; pseudouridylate synthase TruB domain protein; KEGG: ape:APE0990 pseudouridylate synthase. | 0.952 |
cmk | ef1b | Smar_1045 | Smar_0716 | TIGRFAM: cytidylate kinase, putative; KEGG: ape:APE0978 cytidylate kinase. | Translation elongation factor 1B (aEF-1B); Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. | 0.864 |
cmk | ndk | Smar_1045 | Smar_0828 | TIGRFAM: cytidylate kinase, putative; KEGG: ape:APE0978 cytidylate kinase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 0.922 |
cmk | rpl11 | Smar_1045 | Smar_1093 | TIGRFAM: cytidylate kinase, putative; KEGG: ape:APE0978 cytidylate kinase. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. | 0.852 |
cmk | rpl14 | Smar_1045 | Smar_1029 | TIGRFAM: cytidylate kinase, putative; KEGG: ape:APE0978 cytidylate kinase. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.854 |
cmk | rpl14e | Smar_1045 | Smar_1046 | TIGRFAM: cytidylate kinase, putative; KEGG: ape:APE0978 cytidylate kinase. | KEGG: sai:Saci_0813 50S ribosomal protein L14E; Belongs to the eukaryotic ribosomal protein eL14 family. | 0.979 |
cmk | rpl22 | Smar_1045 | Smar_1024 | TIGRFAM: cytidylate kinase, putative; KEGG: ape:APE0978 cytidylate kinase. | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.879 |
cmk | rpl24 | Smar_1045 | Smar_1030 | TIGRFAM: cytidylate kinase, putative; KEGG: ape:APE0978 cytidylate kinase. | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.855 |
cmk | rpl34e | Smar_1045 | Smar_1044 | TIGRFAM: cytidylate kinase, putative; KEGG: ape:APE0978 cytidylate kinase. | PFAM: Ribosomal protein L34e; KEGG: ape:APE0978a S ribosomal protein L34E; Belongs to the eukaryotic ribosomal protein eL34 family. | 0.988 |
cmk | rpl4 | Smar_1045 | Smar_1017 | TIGRFAM: cytidylate kinase, putative; KEGG: ape:APE0978 cytidylate kinase. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.893 |
ef1b | cmk | Smar_0716 | Smar_1045 | Translation elongation factor 1B (aEF-1B); Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. | TIGRFAM: cytidylate kinase, putative; KEGG: ape:APE0978 cytidylate kinase. | 0.864 |
ef1b | ndk | Smar_0716 | Smar_0828 | Translation elongation factor 1B (aEF-1B); Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 0.739 |
ef1b | rpl11 | Smar_0716 | Smar_1093 | Translation elongation factor 1B (aEF-1B); Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. | 0.944 |