STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smar_1411Subtilisin homologue. Serine peptidase. MEROPS family S08A; PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: ape:APE0607 surface layer-associated stable protease; Belongs to the peptidase S8 family. (1345 aa)    
Predicted Functional Partners:
Smar_1412
KEGG: afu:AF1696 small multidrug export protein (QacE).
 
     0.577
Smar_1156
TIGRFAM: bifunctional phosphoglucose/phosphomannose isomerase; PFAM: sugar isomerase (SIS); KEGG: aae:aq_750 hypothetical protein.
 
  
 0.472
Smar_1513
KEGG: pai:PAE2936 hypothetical protein.
 
  
 0.451
Smar_0544
PFAM: protein kinase; SMART: serine/threonine protein kinase; KEGG: sto:ST1996 hypothetical protein.
  
 
 0.450
Smar_1410
KEGG: ape:APE0124 hypothetical protein.
       0.426
Smar_1299
PFAM: protein of unknown function DUF814; KEGG: sto:ST0231 hypothetical protein.
 
  
 0.423
Your Current Organism:
Staphylothermus marinus
NCBI taxonomy Id: 399550
Other names: S. marinus F1, Staphylothermus marinus ATCC 43588, Staphylothermus marinus DSM 3639, Staphylothermus marinus F1, Staphylothermus marinus JCM 9404, Staphylothermus marinus str. F1, Staphylothermus marinus strain F1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.