Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lmor_0782 | Lmor_2907 | Lmor_0782 | Lmor_2907 | Saframycin Mx1 synthetase B. | Saframycin Mx1 synthetase B. | 0.999 |
Lmor_0782 | fAA1_2 | Lmor_0782 | Lmor_2772 | Saframycin Mx1 synthetase B. | AMP-binding protein. | 0.999 |
Lmor_0782 | fabD_1 | Lmor_0782 | Lmor_0310 | Saframycin Mx1 synthetase B. | Malonyl CoA-ACP transacylase. | 0.991 |
Lmor_0782 | fabF_1 | Lmor_0782 | Lmor_1142 | Saframycin Mx1 synthetase B. | 3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.959 |
Lmor_0782 | fabF_2 | Lmor_0782 | Lmor_1605 | Saframycin Mx1 synthetase B. | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.951 |
Lmor_0782 | fabFc | Lmor_0782 | Lmor_2163 | Saframycin Mx1 synthetase B. | Hypothetical protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.954 |
Lmor_0782 | lgrB | Lmor_0782 | Lmor_0671 | Saframycin Mx1 synthetase B. | Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
Lmor_0782 | lgrD | Lmor_0782 | Lmor_1773 | Saframycin Mx1 synthetase B. | Peptide synthetase, non-ribosomal. | 0.999 |
Lmor_0782 | pksJ | Lmor_0782 | Lmor_0580 | Saframycin Mx1 synthetase B. | Polyketide synthase, type I. | 0.999 |
Lmor_0782 | tycC | Lmor_0782 | Lmor_0359 | Saframycin Mx1 synthetase B. | Peptide synthetase, non-ribosomal. | 0.999 |
Lmor_2907 | Lmor_0782 | Lmor_2907 | Lmor_0782 | Saframycin Mx1 synthetase B. | Saframycin Mx1 synthetase B. | 0.999 |
Lmor_2907 | fAA1_2 | Lmor_2907 | Lmor_2772 | Saframycin Mx1 synthetase B. | AMP-binding protein. | 0.999 |
Lmor_2907 | fabD_1 | Lmor_2907 | Lmor_0310 | Saframycin Mx1 synthetase B. | Malonyl CoA-ACP transacylase. | 0.997 |
Lmor_2907 | fabF_1 | Lmor_2907 | Lmor_1142 | Saframycin Mx1 synthetase B. | 3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.977 |
Lmor_2907 | fabF_2 | Lmor_2907 | Lmor_1605 | Saframycin Mx1 synthetase B. | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.973 |
Lmor_2907 | fabFc | Lmor_2907 | Lmor_2163 | Saframycin Mx1 synthetase B. | Hypothetical protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.974 |
Lmor_2907 | lgrB | Lmor_2907 | Lmor_0671 | Saframycin Mx1 synthetase B. | Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.999 |
Lmor_2907 | lgrD | Lmor_2907 | Lmor_1773 | Saframycin Mx1 synthetase B. | Peptide synthetase, non-ribosomal. | 0.999 |
Lmor_2907 | pksJ | Lmor_2907 | Lmor_0580 | Saframycin Mx1 synthetase B. | Polyketide synthase, type I. | 0.999 |
Lmor_2907 | tycC | Lmor_2907 | Lmor_0359 | Saframycin Mx1 synthetase B. | Peptide synthetase, non-ribosomal. | 0.999 |
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