STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacBD-alanyl-D-alanine carboxypeptidase. (596 aa)    
Predicted Functional Partners:
dacA
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family.
     
 0.736
parB_2
Chromosome partitioning protein ParB; Belongs to the ParB family.
       0.671
Lmor_0424
Acid sphingomyelinase-like phosphodiesterase.
 
     0.622
enhA_4
Enhanced entry protein EnhA.
  
  
  0.596
per1
Beta-lactamase.
  
  
  0.586
enhA_3
Enhanced entry protein EnhA.
  
  
  0.578
rodA
Rod shape-determining protein rodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
     
 0.572
enhA_1
Enhanced entry protein EnhA.
  
  
  0.558
Lmor_1549
Enhanced entry protein EnhA.
  
  
  0.557
Lmor_0990
Putative ErfK/YbiS/YcfS/YnhG protein.
     
  0.499
Your Current Organism:
Legionella moravica
NCBI taxonomy Id: 39962
Other names: ATCC 43877, CCUG 31117, CIP 103883, DSM 19234, L. moravica, NCTC 12239, strain 316-36
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