Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lmor_0104 | lysP | Lmor_0104 | Lmor_0530 | Multidrug resistance efflux pump. | Amino acid permease. | 0.424 |
dtpA_1 | lysP | Lmor_0930 | Lmor_0530 | Proton-dependent oligopeptide transporter (POT family). | Amino acid permease. | 0.443 |
dtpA_2 | lysP | Lmor_1587 | Lmor_0530 | POT family transporter protein proton/peptide symporter. | Amino acid permease. | 0.446 |
dtpA_3 | lysP | Lmor_2765 | Lmor_0530 | Proton-dependent oligopeptide transporter (POT family). | Amino acid permease. | 0.479 |
dtpA_4 | lysP | Lmor_2828 | Lmor_0530 | Hypothetical protein. | Amino acid permease. | 0.563 |
dtpB_1 | lysP | Lmor_1052 | Lmor_0530 | Peptide transport protein, POT family. | Amino acid permease. | 0.487 |
lysP | Lmor_0104 | Lmor_0530 | Lmor_0104 | Amino acid permease. | Multidrug resistance efflux pump. | 0.424 |
lysP | dtpA_1 | Lmor_0530 | Lmor_0930 | Amino acid permease. | Proton-dependent oligopeptide transporter (POT family). | 0.443 |
lysP | dtpA_2 | Lmor_0530 | Lmor_1587 | Amino acid permease. | POT family transporter protein proton/peptide symporter. | 0.446 |
lysP | dtpA_3 | Lmor_0530 | Lmor_2765 | Amino acid permease. | Proton-dependent oligopeptide transporter (POT family). | 0.479 |
lysP | dtpA_4 | Lmor_0530 | Lmor_2828 | Amino acid permease. | Hypothetical protein. | 0.563 |
lysP | dtpB_1 | Lmor_0530 | Lmor_1052 | Amino acid permease. | Peptide transport protein, POT family. | 0.487 |
lysP | potE_2 | Lmor_0530 | Lmor_0725 | Amino acid permease. | Amino acid antiporter. | 0.443 |
lysP | steT | Lmor_0530 | Lmor_0545 | Amino acid permease. | Amino acid transporter. | 0.672 |
lysP | yhiP | Lmor_0530 | Lmor_1279 | Amino acid permease. | POT family transporter peptide transport protein. | 0.522 |
lysP | yveA_1 | Lmor_0530 | Lmor_0766 | Amino acid permease. | Amino acid transport protein. | 0.734 |
potE_2 | lysP | Lmor_0725 | Lmor_0530 | Amino acid antiporter. | Amino acid permease. | 0.443 |
potE_2 | yveA_1 | Lmor_0725 | Lmor_0766 | Amino acid antiporter. | Amino acid transport protein. | 0.471 |
steT | lysP | Lmor_0545 | Lmor_0530 | Amino acid transporter. | Amino acid permease. | 0.672 |
steT | yveA_1 | Lmor_0545 | Lmor_0766 | Amino acid transporter. | Amino acid transport protein. | 0.590 |
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