STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmor_0668Hypothetical protein. (419 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase.
  
 0.947
Lmor_2907
Saframycin Mx1 synthetase B.
    
 0.819
Lmor_0784
propionyl-CoA carboxylase subunit beta.
  
 
 0.781
mccB
Propionyl CoA carboxylase subunit beta.
  
 
 0.781
cfiA
Oxaloacetate decarboxylase subunit alpha.
    
  0.728
Lmor_0667
Hypothetical protein.
       0.689
pksJ
Polyketide synthase, type I.
     
 0.658
Lmor_0782
Saframycin Mx1 synthetase B.
    
 0.603
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
    
 0.578
accC_2
Pyruvate carboxylase subunit A.
  
 
 0.537
Your Current Organism:
Legionella moravica
NCBI taxonomy Id: 39962
Other names: ATCC 43877, CCUG 31117, CIP 103883, DSM 19234, L. moravica, NCTC 12239, strain 316-36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.