Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lmor_0608 | Lmor_0774 | Lmor_0608 | Lmor_0774 | Acetyltransferase. | Hypothetical protein. | 0.483 |
Lmor_0608 | Lmor_0775 | Lmor_0608 | Lmor_0775 | Acetyltransferase. | Hypothetical protein. | 0.483 |
Lmor_0608 | Lmor_0782 | Lmor_0608 | Lmor_0782 | Acetyltransferase. | Saframycin Mx1 synthetase B. | 0.999 |
Lmor_0608 | Lmor_1151 | Lmor_0608 | Lmor_1151 | Acetyltransferase. | Rho GTPase (Miro-like). | 0.452 |
Lmor_0608 | alkJ | Lmor_0608 | Lmor_2151 | Acetyltransferase. | Alcohol dehydrogenase (acceptor). | 0.745 |
Lmor_0608 | fAA1_2 | Lmor_0608 | Lmor_2772 | Acetyltransferase. | AMP-binding protein. | 0.971 |
Lmor_0608 | pksJ | Lmor_0608 | Lmor_0580 | Acetyltransferase. | Polyketide synthase, type I. | 0.995 |
Lmor_0608 | yjeA | Lmor_0608 | Lmor_3027 | Acetyltransferase. | Endo-1,4-beta-xylanase-like protein. | 0.450 |
Lmor_0774 | Lmor_0608 | Lmor_0774 | Lmor_0608 | Hypothetical protein. | Acetyltransferase. | 0.483 |
Lmor_0774 | Lmor_0775 | Lmor_0774 | Lmor_0775 | Hypothetical protein. | Hypothetical protein. | 0.554 |
Lmor_0774 | Lmor_0782 | Lmor_0774 | Lmor_0782 | Hypothetical protein. | Saframycin Mx1 synthetase B. | 0.531 |
Lmor_0774 | Lmor_1151 | Lmor_0774 | Lmor_1151 | Hypothetical protein. | Rho GTPase (Miro-like). | 0.527 |
Lmor_0774 | alkJ | Lmor_0774 | Lmor_2151 | Hypothetical protein. | Alcohol dehydrogenase (acceptor). | 0.482 |
Lmor_0774 | apaH | Lmor_0774 | Lmor_1801 | Hypothetical protein. | Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.543 |
Lmor_0774 | fAA1_2 | Lmor_0774 | Lmor_2772 | Hypothetical protein. | AMP-binding protein. | 0.723 |
Lmor_0774 | metG | Lmor_0774 | Lmor_1754 | Hypothetical protein. | Methionyl tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.481 |
Lmor_0774 | pksJ | Lmor_0774 | Lmor_0580 | Hypothetical protein. | Polyketide synthase, type I. | 0.758 |
Lmor_0774 | yjeA | Lmor_0774 | Lmor_3027 | Hypothetical protein. | Endo-1,4-beta-xylanase-like protein. | 0.485 |
Lmor_0775 | Lmor_0608 | Lmor_0775 | Lmor_0608 | Hypothetical protein. | Acetyltransferase. | 0.483 |
Lmor_0775 | Lmor_0774 | Lmor_0775 | Lmor_0774 | Hypothetical protein. | Hypothetical protein. | 0.554 |
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