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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydjZ_1Hypothetical protein. (237 aa)    
Predicted Functional Partners:
merA
Hypothetical protein.
     0.993
lpdA
Dihydrolipoamide dehydrogenase.
      0.904
gor
Glutathione reductase.
      0.866
Lmor_0608
Acetyltransferase.
    
 0.729
aas
2-acylglycerophosphoethanolamine acyltransferase.
    
 0.700
cdsA_1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
  0.676
Lmor_2465
Sterol desaturase.
 
     0.653
ynjF
Cytochrome oxidase-like protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
  0.574
Lmor_1326
Putative Ser/Thr protein kinase.
 
     0.527
uppS
Undecaprenyl pyrophosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.
       0.518
Your Current Organism:
Legionella moravica
NCBI taxonomy Id: 39962
Other names: ATCC 43877, CCUG 31117, CIP 103883, DSM 19234, L. moravica, NCTC 12239, strain 316-36
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