STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctpA_1Carboxy-terminal protease; Belongs to the peptidase S41A family. (444 aa)    
Predicted Functional Partners:
Lmor_1645
Hypothetical protein.
    
 
 0.947
envC
Peptidase, M23/M37 family.
  
    0.847
Lmor_0229
Transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat).
   
   0.724
Lmor_0340
Transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat).
   
   0.724
Lmor_1016
Transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat).
   
   0.724
rtxA2_1
Structural toxin protein RtxA.
   
   0.724
Lmor_1881
Metalloproteinase-like protein.
   
   0.724
rtxA2_2
Structural toxin protein RtxA.
   
   0.724
cfiA
Oxaloacetate decarboxylase subunit alpha.
  
    0.720
Lmor_2232
Glutamate--cysteine ligase.
   
  0.698
Your Current Organism:
Legionella moravica
NCBI taxonomy Id: 39962
Other names: ATCC 43877, CCUG 31117, CIP 103883, DSM 19234, L. moravica, NCTC 12239, strain 316-36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.