STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lspK_1Type II secretory pathway protein. (313 aa)    
Predicted Functional Partners:
lspJ
Type II secretory pathway protein LspJ.
 
 
 0.998
lspI
Type II secretory pathway protein LspI.
 
 
 0.997
gspH
General secretion pathway protein LspH.
 
 
 0.989
lspG
Type II secretory pathway protein LspG.
 
 
 0.988
lspD
Type II protein secretion LspD.
 
   
 0.857
lspF
Type II secretory pathway protein LspF.
 
   
 0.847
yghD
Putative general secretion pathway protein YghD.
 
  
 0.815
Lmor_2207
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
  
 0.810
Lmor_2990
General secretion pathway protein C.
 
  
 0.808
Lmor_2580
Hypothetical protein.
  
 
 0.783
Your Current Organism:
Legionella moravica
NCBI taxonomy Id: 39962
Other names: ATCC 43877, CCUG 31117, CIP 103883, DSM 19234, L. moravica, NCTC 12239, strain 316-36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.