STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hopD2_2Tyrosine phosphatase II superfamily transporter protein. (322 aa)    
Predicted Functional Partners:
yjeA
Endo-1,4-beta-xylanase-like protein.
  
 0.929
Lmor_1151
Rho GTPase (Miro-like).
    
 0.819
ankQ
Substrate of the Dot/Icm secretion system.
  
 
  0.819
Lmor_0768
Microtubule binding protein.
  
 
   0.777
Lmor_2463
Calcium-transporting ATPase.
  
 
   0.777
lepA_1
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
    
  0.774
Lmor_0802
Acetylpolyamine aminohydrolase.
  
 
   0.771
rssA
Esterase of the alpha-beta hydrolase superfamily protein.
  
  
  0.762
Lmor_2937
Photosystem I assembly protein Ycf3.
  
  0.750
Lmor_0788
2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase.
  
     0.743
Your Current Organism:
Legionella moravica
NCBI taxonomy Id: 39962
Other names: ATCC 43877, CCUG 31117, CIP 103883, DSM 19234, L. moravica, NCTC 12239, strain 316-36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.