STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DWF7-dehydrocholesterol reductase. (431 aa)    
Predicted Functional Partners:
ptp
Serine carboxypeptidase.
  
     0.755
Lmor_3154
Hypothetical protein.
  
     0.732
Lmor_0689
Substrate of the Dot/Icm secretion system.
  
     0.723
Lmor_1151
Rho GTPase (Miro-like).
  
 
  0.722
Lmor_3169
Serine/threonine protein kinase.
  
     0.664
ralF
RalF protein, translocated into host cells by the Dot/Icm system.
  
     0.650
Lmor_2203
Ankyrin repeat protein.
  
 
   0.619
legL1
Gala protein type 1, 3 or 4.
  
     0.569
hopD2_2
Tyrosine phosphatase II superfamily transporter protein.
  
     0.564
Lmor_0883
Cyclin.
  
     0.563
Your Current Organism:
Legionella moravica
NCBI taxonomy Id: 39962
Other names: ATCC 43877, CCUG 31117, CIP 103883, DSM 19234, L. moravica, NCTC 12239, strain 316-36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.