Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lmor_2091Protein IcmG (DotF). (270 aa)    
Predicted Functional Partners:
spkB
Protein IcmE (DotG).
   
 
 0.983
Lmor_2089
IcmK protein.
   
 
 0.977
lphA
LphA (DotK).
   
   0.963
icmM/dotJ
Component of the Dot/Icm secretion system, predicted inner membrane protein.
     
 0.921
Lmor_2092
IcmC (DotE).
     
 0.892
Lmor_2088
Protein IcmL (DotI).
     
 0.885
icmD
IcmD (DotP).
   
 
 0.867
dotC
Defect in organelle trafficking lipoprotein DotC.
    
 
 0.862
icmX
Intracellular multiplication protein IcmX.
    
 
 0.858
dotD
Lipoprotein DotD.
    
 
 0.858
Your Current Organism:
Legionella moravica
NCBI taxonomy Id: 39962
Other names: ATCC 43877, CCUG 31117, CIP 103883, DSM 19234, L. moravica, NCTC 12239, strain 316-36
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