STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmor_2092IcmC (DotE). (190 aa)    
Predicted Functional Partners:
Lmor_2091
Protein IcmG (DotF).
     
 0.823
Lmor_2088
Protein IcmL (DotI).
     
 0.790
spkB
Protein IcmE (DotG).
     
 0.765
icmD
IcmD (DotP).
     
 0.760
Lmor_2089
IcmK protein.
       0.757
icmM/dotJ
Component of the Dot/Icm secretion system, predicted inner membrane protein.
     
 0.737
lphA
LphA (DotK).
       0.736
Lmor_2094
IcmJ protein.
       0.477
Lmor_2084
IcmP protein.
       0.448
Lmor_2085
Protein IcmO (DotL).
       0.448
Your Current Organism:
Legionella moravica
NCBI taxonomy Id: 39962
Other names: ATCC 43877, CCUG 31117, CIP 103883, DSM 19234, L. moravica, NCTC 12239, strain 316-36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.