Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ccmA_1ABC transporter ATP binding protein. (304 aa)    
Predicted Functional Partners:
yadH
ABC transporter permease.
 
 0.988
ybhS
ABC transporter permease.
 
 
 0.952
ybhR
Transmembrane protein, ABC-type multidrug transport system.
 
 
 0.809
Lmor_2131
Hypothetical protein.
       0.752
Lmor_2126
SM-20-like protein.
       0.568
wzm
ABC transporter of LPS O-antigen, Wzm.
    
 0.551
macB_1
ABC transporter permease.
 
      0.514
Lmor_2128
VipA.
       0.510
atpC_1
F1 sector of membrane-bound ATP synthase, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.491
atpC_2
F-type H -transporting ATPase epsilon chain.
    
   0.491
Your Current Organism:
Legionella moravica
NCBI taxonomy Id: 39962
Other names: ATCC 43877, CCUG 31117, CIP 103883, DSM 19234, L. moravica, NCTC 12239, strain 316-36
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