Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
arcB_2 | arcB_3 | Lmor_1948 | Lmor_0358 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
arcB_2 | arcB_4 | Lmor_1948 | Lmor_0874 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
arcB_2 | arcB_6 | Lmor_1948 | Lmor_1774 | Sensory histidine-kinase / response regulator. | Sensory box histidine kinase/response regulator. | 0.999 |
arcB_2 | arcB_7 | Lmor_1948 | Lmor_0020 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
arcB_2 | arlR | Lmor_1948 | Lmor_0870 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
arcB_2 | barA_2 | Lmor_1948 | Lmor_2815 | Sensory histidine-kinase / response regulator. | Sensory box histidine kinase/response regulator. | 0.999 |
arcB_2 | gacS/letS | Lmor_1948 | Lmor_2523 | Sensory histidine-kinase / response regulator. | Transmission sensor LetS. | 0.999 |
arcB_2 | menB | Lmor_1948 | Lmor_2252 | Sensory histidine-kinase / response regulator. | Enoyl CoA hydratase/isomerase (crotonase). | 0.984 |
arcB_2 | prkC | Lmor_1948 | Lmor_0101 | Sensory histidine-kinase / response regulator. | GGDEF domain-containing sensory box protein. | 0.999 |
arcB_3 | arcB_2 | Lmor_0358 | Lmor_1948 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
arcB_3 | arcB_4 | Lmor_0358 | Lmor_0874 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
arcB_3 | arcB_6 | Lmor_0358 | Lmor_1774 | Sensory histidine-kinase / response regulator. | Sensory box histidine kinase/response regulator. | 0.999 |
arcB_3 | arcB_7 | Lmor_0358 | Lmor_0020 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
arcB_3 | arlR | Lmor_0358 | Lmor_0870 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
arcB_3 | barA_2 | Lmor_0358 | Lmor_2815 | Sensory histidine-kinase / response regulator. | Sensory box histidine kinase/response regulator. | 0.999 |
arcB_3 | gacS/letS | Lmor_0358 | Lmor_2523 | Sensory histidine-kinase / response regulator. | Transmission sensor LetS. | 0.999 |
arcB_3 | menB | Lmor_0358 | Lmor_2252 | Sensory histidine-kinase / response regulator. | Enoyl CoA hydratase/isomerase (crotonase). | 0.984 |
arcB_3 | prkC | Lmor_0358 | Lmor_0101 | Sensory histidine-kinase / response regulator. | GGDEF domain-containing sensory box protein. | 0.999 |
arcB_4 | arcB_2 | Lmor_0874 | Lmor_1948 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
arcB_4 | arcB_3 | Lmor_0874 | Lmor_0358 | Sensory histidine-kinase / response regulator. | Sensory histidine-kinase / response regulator. | 0.999 |
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