Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lmor_0415 | Lmor_2506 | Lmor_0415 | Lmor_2506 | LysM domain-containing protein. | Transmembrane protein. | 0.748 |
Lmor_0415 | Lmor_2507 | Lmor_0415 | Lmor_2507 | LysM domain-containing protein. | Transglutaminase. | 0.737 |
Lmor_0415 | Lmor_2695 | Lmor_0415 | Lmor_2695 | LysM domain-containing protein. | Type IV pilus biogenesis protein PilO. | 0.944 |
Lmor_0415 | Lmor_2696 | Lmor_0415 | Lmor_2696 | LysM domain-containing protein. | Type IV pilus biogenesis protein PilP. | 0.933 |
Lmor_0415 | fimT | Lmor_0415 | Lmor_0824 | LysM domain-containing protein. | Type IV pre-pilin. | 0.708 |
Lmor_0415 | pilE | Lmor_0415 | Lmor_0819 | LysM domain-containing protein. | type-IV pilin. | 0.759 |
Lmor_0415 | pilM | Lmor_0415 | Lmor_2693 | LysM domain-containing protein. | Tfp pilus assembly protein, ATPase PilM. | 0.943 |
Lmor_0415 | pilN | Lmor_0415 | Lmor_2694 | LysM domain-containing protein. | Tfp pilus assembly protein PilN. | 0.945 |
Lmor_0415 | pilZ_1 | Lmor_0415 | Lmor_1609 | LysM domain-containing protein. | Type 4 fimbrial biogenesis protein PilZ. | 0.775 |
Lmor_2505 | Lmor_2506 | Lmor_2505 | Lmor_2506 | Methanol dehydrogenase regulatory protein. | Transmembrane protein. | 0.902 |
Lmor_2505 | Lmor_2507 | Lmor_2505 | Lmor_2507 | Methanol dehydrogenase regulatory protein. | Transglutaminase. | 0.948 |
Lmor_2506 | Lmor_0415 | Lmor_2506 | Lmor_0415 | Transmembrane protein. | LysM domain-containing protein. | 0.748 |
Lmor_2506 | Lmor_2505 | Lmor_2506 | Lmor_2505 | Transmembrane protein. | Methanol dehydrogenase regulatory protein. | 0.902 |
Lmor_2506 | Lmor_2507 | Lmor_2506 | Lmor_2507 | Transmembrane protein. | Transglutaminase. | 0.971 |
Lmor_2506 | Lmor_2695 | Lmor_2506 | Lmor_2695 | Transmembrane protein. | Type IV pilus biogenesis protein PilO. | 0.688 |
Lmor_2506 | Lmor_2696 | Lmor_2506 | Lmor_2696 | Transmembrane protein. | Type IV pilus biogenesis protein PilP. | 0.766 |
Lmor_2506 | fimT | Lmor_2506 | Lmor_0824 | Transmembrane protein. | Type IV pre-pilin. | 0.706 |
Lmor_2506 | pilE | Lmor_2506 | Lmor_0819 | Transmembrane protein. | type-IV pilin. | 0.733 |
Lmor_2506 | pilM | Lmor_2506 | Lmor_2693 | Transmembrane protein. | Tfp pilus assembly protein, ATPase PilM. | 0.711 |
Lmor_2506 | pilN | Lmor_2506 | Lmor_2694 | Transmembrane protein. | Tfp pilus assembly protein PilN. | 0.747 |
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