STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmor_2538Ankyrin repeat protein. (306 aa)    
Predicted Functional Partners:
pksJ
Polyketide synthase, type I.
    
 0.758
fAA1_2
AMP-binding protein.
   
  0.723
Lmor_2539
Coiled-coil protein.
       0.610
apaH
Bis(5'-nucleosyl)-tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.543
Lmor_0782
Saframycin Mx1 synthetase B.
    
  0.531
Lmor_1151
Rho GTPase (Miro-like).
    
  0.527
pilZ_2
Type IV pilus assembly PilZ.
       0.510
yjeA
Endo-1,4-beta-xylanase-like protein.
    
  0.485
Lmor_0608
Acetyltransferase.
    
  0.483
alkJ
Alcohol dehydrogenase (acceptor).
    
  0.482
Your Current Organism:
Legionella moravica
NCBI taxonomy Id: 39962
Other names: ATCC 43877, CCUG 31117, CIP 103883, DSM 19234, L. moravica, NCTC 12239, strain 316-36
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