Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lmor_2578 | Lmor_2579 | Lmor_2578 | Lmor_2579 | Hypothetical protein. | Hypothetical protein. | 0.805 |
Lmor_2578 | Lmor_2580 | Lmor_2578 | Lmor_2580 | Hypothetical protein. | Hypothetical protein. | 0.805 |
Lmor_2578 | aaeB | Lmor_2578 | Lmor_2576 | Hypothetical protein. | P-hydroxybenzoic acid efflux pump subunit AaeB. | 0.593 |
Lmor_2578 | emrA_1 | Lmor_2578 | Lmor_2577 | Hypothetical protein. | Hemolysin D. | 0.593 |
Lmor_2578 | mltA_1 | Lmor_2578 | Lmor_2575 | Hypothetical protein. | Membrane-bound lytic murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.439 |
Lmor_2579 | Lmor_2578 | Lmor_2579 | Lmor_2578 | Hypothetical protein. | Hypothetical protein. | 0.805 |
Lmor_2579 | Lmor_2580 | Lmor_2579 | Lmor_2580 | Hypothetical protein. | Hypothetical protein. | 0.808 |
Lmor_2579 | aaeB | Lmor_2579 | Lmor_2576 | Hypothetical protein. | P-hydroxybenzoic acid efflux pump subunit AaeB. | 0.593 |
Lmor_2579 | emrA_1 | Lmor_2579 | Lmor_2577 | Hypothetical protein. | Hemolysin D. | 0.593 |
Lmor_2579 | mltA_1 | Lmor_2579 | Lmor_2575 | Hypothetical protein. | Membrane-bound lytic murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.442 |
Lmor_2580 | Lmor_2578 | Lmor_2580 | Lmor_2578 | Hypothetical protein. | Hypothetical protein. | 0.805 |
Lmor_2580 | Lmor_2579 | Lmor_2580 | Lmor_2579 | Hypothetical protein. | Hypothetical protein. | 0.808 |
Lmor_2580 | aaeB | Lmor_2580 | Lmor_2576 | Hypothetical protein. | P-hydroxybenzoic acid efflux pump subunit AaeB. | 0.593 |
Lmor_2580 | emrA_1 | Lmor_2580 | Lmor_2577 | Hypothetical protein. | Hemolysin D. | 0.593 |
Lmor_2580 | mltA_1 | Lmor_2580 | Lmor_2575 | Hypothetical protein. | Membrane-bound lytic murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.442 |
aaeB | Lmor_2578 | Lmor_2576 | Lmor_2578 | P-hydroxybenzoic acid efflux pump subunit AaeB. | Hypothetical protein. | 0.593 |
aaeB | Lmor_2579 | Lmor_2576 | Lmor_2579 | P-hydroxybenzoic acid efflux pump subunit AaeB. | Hypothetical protein. | 0.593 |
aaeB | Lmor_2580 | Lmor_2576 | Lmor_2580 | P-hydroxybenzoic acid efflux pump subunit AaeB. | Hypothetical protein. | 0.593 |
aaeB | emrA_1 | Lmor_2576 | Lmor_2577 | P-hydroxybenzoic acid efflux pump subunit AaeB. | Hemolysin D. | 0.918 |
aaeB | mltA_1 | Lmor_2576 | Lmor_2575 | P-hydroxybenzoic acid efflux pump subunit AaeB. | Membrane-bound lytic murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. | 0.604 |
page 1 of 2