STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fAA1_1AMP-binding protein. (555 aa)    
Predicted Functional Partners:
fAA1_2
AMP-binding protein.
 
  
0.857
pksJ
Polyketide synthase, type I.
   
 0.849
Lmor_2907
Saframycin Mx1 synthetase B.
 
  
 0.848
Lmor_0782
Saframycin Mx1 synthetase B.
  
 
 0.824
Lmor_0608
Acetyltransferase.
    
0.819
lgrD
Peptide synthetase, non-ribosomal.
    
 0.819
aas
2-acylglycerophosphoethanolamine acyltransferase.
    
0.787
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.773
rplE
50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.
    
 
 0.756
ychK
Phosphoesterase.
    
  0.739
Your Current Organism:
Legionella moravica
NCBI taxonomy Id: 39962
Other names: ATCC 43877, CCUG 31117, CIP 103883, DSM 19234, L. moravica, NCTC 12239, strain 316-36
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.