Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
iraASmall-molecule methyltransferase IraA. (272 aa)    
Predicted Functional Partners:
dtpA_4
Hypothetical protein.
     
 0.838
Lmor_2915
Hypothetical protein.
  
  
  0.811
Lmor_1749
Hypothetical protein.
  
     0.774
Lmor_0419
Hypothetical protein.
  
     0.773
Lmor_1624
Hypothetical protein.
  
     0.773
Lmor_2987
Hypothetical protein.
  
     0.769
tolC_2
Outer membrane efflux protein.
  
     0.768
yjeA
Endo-1,4-beta-xylanase-like protein.
  
     0.764
Lmor_0558
Hypothetical protein.
  
     0.763
Lmor_2700
DamX-related protein.
  
     0.763
Your Current Organism:
Legionella moravica
NCBI taxonomy Id: 39962
Other names: ATCC 43877, CCUG 31117, CIP 103883, DSM 19234, L. moravica, NCTC 12239, strain 316-36
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