Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lmor_0768 | Lmor_1538 | Lmor_0768 | Lmor_1538 | Microtubule binding protein. | EPTP domain protein. | 0.682 |
Lmor_0768 | Lmor_2046 | Lmor_0768 | Lmor_2046 | Microtubule binding protein. | Ankyrin repeat-containing protein. | 0.508 |
Lmor_0768 | Lmor_2408 | Lmor_0768 | Lmor_2408 | Microtubule binding protein. | Transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat). | 0.571 |
Lmor_0768 | Lmor_3175 | Lmor_0768 | Lmor_3175 | Microtubule binding protein. | Fic/DOC family protein. | 0.669 |
Lmor_0768 | ankQ | Lmor_0768 | Lmor_3077 | Microtubule binding protein. | Substrate of the Dot/Icm secretion system. | 0.791 |
Lmor_0768 | grpB_2 | Lmor_0768 | Lmor_3147 | Microtubule binding protein. | Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | 0.620 |
Lmor_0768 | pagN | Lmor_0768 | Lmor_0281 | Microtubule binding protein. | SapA-like protein. | 0.553 |
Lmor_1538 | Lmor_0768 | Lmor_1538 | Lmor_0768 | EPTP domain protein. | Microtubule binding protein. | 0.682 |
Lmor_1538 | Lmor_2046 | Lmor_1538 | Lmor_2046 | EPTP domain protein. | Ankyrin repeat-containing protein. | 0.600 |
Lmor_1538 | Lmor_2408 | Lmor_1538 | Lmor_2408 | EPTP domain protein. | Transmembrane protein (fibronectin III domain and Gp5 C-terminal repeat). | 0.416 |
Lmor_1538 | Lmor_3175 | Lmor_1538 | Lmor_3175 | EPTP domain protein. | Fic/DOC family protein. | 0.774 |
Lmor_1538 | aaeB | Lmor_1538 | Lmor_2576 | EPTP domain protein. | P-hydroxybenzoic acid efflux pump subunit AaeB. | 0.634 |
Lmor_1538 | ankQ | Lmor_1538 | Lmor_3077 | EPTP domain protein. | Substrate of the Dot/Icm secretion system. | 0.567 |
Lmor_1538 | arp_5 | Lmor_1538 | Lmor_2023 | EPTP domain protein. | Ankyrin repeat protein. | 0.765 |
Lmor_1538 | grpB_2 | Lmor_1538 | Lmor_3147 | EPTP domain protein. | Multifunctional nucleotidyltransferase/glutamate rich protein GrpB/ribosomal protein alanine acetyltransferase. | 0.464 |
Lmor_1538 | pagN | Lmor_1538 | Lmor_0281 | EPTP domain protein. | SapA-like protein. | 0.578 |
Lmor_2046 | Lmor_0768 | Lmor_2046 | Lmor_0768 | Ankyrin repeat-containing protein. | Microtubule binding protein. | 0.508 |
Lmor_2046 | Lmor_1538 | Lmor_2046 | Lmor_1538 | Ankyrin repeat-containing protein. | EPTP domain protein. | 0.600 |
Lmor_2046 | Lmor_3175 | Lmor_2046 | Lmor_3175 | Ankyrin repeat-containing protein. | Fic/DOC family protein. | 0.619 |
Lmor_2046 | ankQ | Lmor_2046 | Lmor_3077 | Ankyrin repeat-containing protein. | Substrate of the Dot/Icm secretion system. | 0.432 |
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