STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHR5Protein CHROMATIN REMODELING 5. (1498 aa)    
Predicted Functional Partners:
RPB3
DNA-directed RNA polymerase II subunit RPB3.
    
 0.769
arp5
Actin-like protein arp5; Belongs to the actin family.
    
 0.764
Hypma_015347
Uncharacterized protein.
   
 0.757
rpb6
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
 0.752
rpb4
DNA-directed RNA polymerase II subunit rpb4.
    
 0.727
rpb10
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
  0.727
HTZ1
Histone H2A.Z; Belongs to the histone H2A family.
    
 0.726
rpc10
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
  0.726
rpb-5
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
    
  0.726
Polr2j
DNA-directed RNA polymerase II subunit RPB11.
    
  0.726
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.