STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXW7F-box/WD repeat-containing protein 7. (1095 aa)    
Predicted Functional Partners:
Hypma_010085
Uncharacterized protein C24B11.05.
 
   
  0.975
Rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.850
Hypma_002824
Uncharacterized protein.
    
 0.804
sconC
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.804
rml2
54S ribosomal protein rml2, mitochondrial.
    
 0.791
ned-8
NEDD8.
    
 0.755
RpL8
60S ribosomal protein L8.
    
  0.728
culA_1
Cullin-1; Belongs to the cullin family.
    
 0.727
culA_0
Cullin-1; Belongs to the cullin family.
    
 0.727
cul3
Cullin-3; Belongs to the cullin family.
    
 0.727
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.