STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UPF1_0Regulator of nonsense transcripts 1. (517 aa)    
Predicted Functional Partners:
UPF2
Regulator of nonsense transcripts UPF2.
   
 0.965
UPF3
Regulator of nonsense transcripts UPF3.
    
 0.963
Hypma_009593
RNA-binding protein with serine-rich domain 1.
    
 0.937
rbm8a
RNA-binding protein 8A.
    
 0.910
Hypma_008825
PINc domain-containing protein.
    
 0.875
SMG7
Protein SMG7.
    
 0.856
PAB1_0
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.849
NCBP2
Nuclear cap-binding protein subunit 2.
    
 0.845
Cbp80
Nuclear cap-binding protein subunit 1.
    
 0.823
SU2
Eukaryotic peptide chain release factor subunit 1.
   
 0.808
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
Server load: low (22%) [HD]