STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG1Serine/threonine-protein kinase ATG1. (874 aa)    
Predicted Functional Partners:
ATG13
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.998
ATG9
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.997
ATG2
Autophagy-related protein 2.
   
 0.996
ATG8
Autophagy-related protein.
   
 0.995
Atg6
Beclin-1-like protein.
    
 0.995
atg11
Autophagy-related protein 11.
    
 0.994
tor2
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.993
Hypma_013602
Uncharacterized protein.
    
 0.993
ppk19
Serine/threonine-protein kinase ppk19.
    
 0.986
pik3c3
Phosphatidylinositol 3-kinase VPS34.
    
 0.986
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.