STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_003597VPS9 domain-containing protein. (1095 aa)    
Predicted Functional Partners:
tif222
Putative translation initiation factor eIF-2B subunit beta; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.920
vps901
Vacuolar protein sorting-associated protein 9a.
    
 
0.881
RAB5B
Ras-related protein Rab-5B.
    
 0.859
Hypma_001833
Alginate_lyase domain-containing protein.
    
 0.852
VPS21
Vacuolar protein sorting-associated protein 21.
    
 0.852
RYL2
Ras-like GTP-binding protein RYL2.
    
 0.848
vps29
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.824
rpn6
Putative 26S proteasome regulatory subunit rpn6.
    
  0.672
VPS35B
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.663
Hypma_006089
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.659
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
Server load: low (28%) [HD]